Proceedings of the 3rd International Conference on Sustainable Agriculture for Rural Development (ICSARD 2022)

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Genetic Diversity of Cogongrass [Imperata Cylindrica (L.) Raeusch] in Java Island Based on psbA-trnH IGS

Authors
Murni Dwiati1, *, Talita Ade Novita Dewi1, Agus Hery Susanto1
1The Faculty of Biology, Universitas Jenderal Soedirman, Purwokerto, Indonesia
*Corresponding author. Email: murni.dwiati@unsoed.ac.id
Corresponding Author
Murni Dwiati
Available Online 19 April 2023.
DOI
10.2991/978-94-6463-128-9_22How to use a DOI?
Keywords
cogongrass; genetic diversity; Java Island; psbA-trnH
Abstract

Cogongrass [Imperata cylindrica (L.) Raeusch] is a wild plant species widely distributed throughout various tropical and subtropical regions. The wide distribution may lead to genetic differences among the species populations, which can be analyzed using particular molecular markers showing high mutation rate. This study was aimed aims to assess the genetic diversity of cogongrass in Java Island, Indonesia, and the genetic relationship among the populations based on psbA-trnH IGS. Plant samples were taken randomly from several places in Java, namely Purwokerto, Jetis Beach, Purworejo, Yogyakarta, and Ponorogo. The molecular analysis involved genomic DNA extraction, amplification of psbA-trnH IGS, and sequencing of psbA-trnH IGS. The results showed that cogongrass populations in Java had a high genetic diversity with respect to haplotype diversity (h = 1) but low genetic diversity in terms of nucleotide diversity (π = 0.00658). This suggested a very close genetic relationship among cogongrass populations in the island, which can also be seen from the low values of genetic distances.

Copyright
© 2023 The Author(s)
Open Access
Open Access This chapter is licensed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/), which permits any noncommercial use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made.

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Volume Title
Proceedings of the 3rd International Conference on Sustainable Agriculture for Rural Development (ICSARD 2022)
Series
Advances in Biological Sciences Research
Publication Date
19 April 2023
ISBN
10.2991/978-94-6463-128-9_22
ISSN
2468-5747
DOI
10.2991/978-94-6463-128-9_22How to use a DOI?
Copyright
© 2023 The Author(s)
Open Access
Open Access This chapter is licensed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/), which permits any noncommercial use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made.

Cite this article

risenwbib
TY  - CONF
AU  - Murni Dwiati
AU  - Talita Ade Novita Dewi
AU  - Agus Hery Susanto
PY  - 2023
DA  - 2023/04/19
TI  - Genetic Diversity of Cogongrass [Imperata Cylindrica (L.) Raeusch] in Java Island Based on psbA-trnH IGS
BT  - Proceedings of the 3rd International Conference on Sustainable Agriculture for Rural Development (ICSARD 2022)
PB  - Atlantis Press
SP  - 208
EP  - 216
SN  - 2468-5747
UR  - https://doi.org/10.2991/978-94-6463-128-9_22
DO  - 10.2991/978-94-6463-128-9_22
ID  - Dwiati2023
ER  -