Proceedings of 2013 International Conference on Information Science and Computer Applications

Modeling for Vibrio fischeri quorum sensing phenomenon based on Multicompartmental Gillespie algorithm

Authors
Ji Hu, Xiaoping Wang, Xiaoping Xue
Corresponding Author
Ji Hu
Available Online October 2013.
DOI
https://doi.org/10.2991/isca-13.2013.38How to use a DOI?
Keywords
Biological systems; Quorum Sensing; Multicompartmental Gillespie algorithm; Formal Modeling and Analysis
Abstract
Our research purpose is abstracting computational model from the structure and function as well as collaboration among the biolo58gical cells. Quorum sensing P system means bacteria produce specific signaling molecules spontaneously and sense the change in their concentration. In this paper, we use multicompartmental Gillespie algorithm to model and simulate Vibrio fischeri’s quorum sensing phenomenon. We put forward an algorithm considering communication and synchronization of each reaction space in a multi-environment p system, whose effectiveness is verified by simulation tools such as CellDesigner and Scilab. At last we propose an idea of using this P System into Multi-Agent System.
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Proceedings
2013 International Conference on Information Science and Computer Applications (ISCA 2013)
Part of series
Advances in Intelligent Systems Research
Publication Date
October 2013
ISBN
978-90786-77-85-7
DOI
https://doi.org/10.2991/isca-13.2013.38How to use a DOI?
Open Access
This is an open access article distributed under the CC BY-NC license.

Cite this article

TY  - CONF
AU  - Ji Hu
AU  - Xiaoping Wang
AU  - Xiaoping Xue
PY  - 2013/10
DA  - 2013/10
TI  - Modeling for Vibrio fischeri quorum sensing phenomenon based on Multicompartmental Gillespie algorithm
BT  - 2013 International Conference on Information Science and Computer Applications (ISCA 2013)
PB  - Atlantis Press
UR  - https://doi.org/10.2991/isca-13.2013.38
DO  - https://doi.org/10.2991/isca-13.2013.38
ID  - Hu2013/10
ER  -