Genome-wide Investigation of MADS-box Members and Validation of a New Member MADS8 in Fragaria Vesca

DOI

10.2991/bst-17.2018.18How to use a DOI?

Keywords

Strawberry, MADS, Genome wide identification, Clone.

Abstract

Based on the whole genome sequence of Fragria visca, the members of the MADS gene family in strawberry genome were identified and analyzed. The MADS-box containing proteins were searched using both hidden markov model fitting with Arabidopsis thaliana proteins, and de novo prediction. 85 MADS-box protein coding genes were identified, with 74 with confidence. Five new proteins that were not annotated in the genome were found, one of which, MADS8, was experimentally validated. These results provide useful information for functional studies of this important protein family.

Copyright

© 2018, the Authors. Published by Atlantis Press.

Open Access

This is an open access article distributed under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).

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TY  - CONF
AU  - Min Zhou
AU  - Yan Wang
AU  - Hao-Ru Tang
AU  - Qing Chen
PY  - 2018/02
DA  - 2018/02
TI  - Genome-wide Investigation of MADS-box Members and Validation of a New Member MADS8 in Fragaria Vesca
BT  - Proceedings of the 2017 2nd International Conference on Biological Sciences and Technology (BST 2017)
PB  - Atlantis Press
SP  - 122
EP  - 127
SN  - 2468-5747
UR  - https://doi.org/10.2991/bst-17.2018.18
DO  - 10.2991/bst-17.2018.18
ID  - Zhou2018/02
ER  -